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* chore: Move everything into one big crateBenedikt Peetz3 days
| | | | | That helps remove duplicated code and rustc/cargo will now also show dead code correctly.
* chore: Remove some unused rust codeBenedikt Peetz3 days
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* feat: Capture command output + expose to new `atuin_output` tool (#3510)Michelle Tilley6 days
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* fix: ensure local key matches remote data before syncing (#3474)Ellie Huxtable2026-05-12
| | | | | | | | | | | | | | | We rely on the user to manage their keys. This is ok, and is intentionally part of our security model However. If the user messes up, they corrupt their remote store. It is possible to work around and fix, but not without difficulty. This change ensures that if the local key does not match the remote data, no data is synced and the user has a chance to fix it before breaking things. ## Checks - [ ] I am happy for maintainers to push small adjustments to this PR, to speed up the review cycle - [ ] I have checked that there are no existing pull requests for the same thing
* feat: remove agent search from tui (#3397)Ellie Huxtable2026-04-13
| | | | | | | | | | | | | This is essentially not a useful place to search agent history Right now, using the CLI is the best way to explore this. We are looking into building another TUI for searching records more widely and in more detail ## Checks - [ ] I am happy for maintainers to push small adjustments to this PR, to speed up the review cycle - [ ] I have checked that there are no existing pull requests for the same thing
* feat: track coding agent shell usage (#3388)Ellie Huxtable2026-04-11
| | | | | | | | | | | https://github.com/user-attachments/assets/7868c7a4-6a91-4c93-ac6a-e8665cf1f799 ## Checks - [ ] I am happy for maintainers to push small adjustments to this PR, to speed up the review cycle - [ ] I have checked that there are no existing pull requests for the same thing
* feat: add history tail for live monitoring view (#3389)Ellie Huxtable2026-04-11
| | | | | | | | | | Useful for watching what agents are doing, or viewing live info from other machines. Regardless I am liking it for debugging ## Checks - [ ] I am happy for maintainers to push small adjustments to this PR, to speed up the review cycle - [ ] I have checked that there are no existing pull requests for the same thing
* feat: Initialize Atuin AI by default with `atuin init` (#3255)Michelle Tilley2026-03-11
| | | | | | | * Run Atuin AI's `init` during main `init` for bash, zsh, and fish * Note that logging into Hub will enable sync * Add instructions for users with existing sync accounts * Ensure daemon respects `auto_sync` setting * Update docs on disabling Atuin AI
* feat: Allow setting multipliers for frequency, recency, and frecency scores ↵Michelle Tilley2026-03-05
| | | | (#3235)
* feat: In-memory search index with atuin daemon (#3201)Michelle Tilley2026-02-26
## Summary This PR adds a persistent, in-memory search index to the Atuin daemon, enabling fast fuzzy search without the startup delay of building an index each time the TUI opens. ### Key Changes - **Daemon search service**: A new gRPC service that maintains a Nucleo fuzzy search index in memory - **Real-time index updates**: The daemon listens for history events (new commands, synced records) and updates the index immediately - **Filter mode support**: All existing filter modes work (Global, Host, Session, Directory, Workspace) - **New search engine**: `daemon-fuzzy` search mode that queries the daemon instead of building a local index - **Paged history loading**: Database pagination support for efficient initial index loading - **Configurable logging**: New `[logs]` settings section for daemon and search log configuration - **Component-based daemon architecture**: Refactored daemon internals into a modular, event-driven system - **Fallback to DB search for regex**: Since Nucleo doesn't support regex matching ## Daemon Architecture The daemon has been refactored to use a component-based, event-driven architecture that makes it easier to add new functionality and reason about the system. ### Core Concepts ``` ┌─────────────────────────────────────────────────────────────────────────────┐ │ Atuin Daemon │ │ │ │ ┌─────────────┐ ┌──────────────────────────────────────────────────┐ │ │ │ Daemon │ │ Components │ │ │ │ Handle │────▶│ │ │ │ │ │ │ ┌─────────────┐ ┌─────────────┐ ┌────────────┐ │ │ │ │ • emit() │ │ │ History │ │ Search │ │ Sync │ │ │ │ │ • subscribe │ │ │ Component │ │ Component │ │ Component │ │ │ │ │ • settings │ │ │ │ │ │ │ │ │ │ │ │ • databases │ │ │ gRPC service│ │ gRPC service│ │ background │ │ │ │ └─────────────┘ │ │ WIP history │ │ Nucleo index│ │ sync │ │ │ │ │ │ └─────────────┘ └─────────────┘ └────────────┘ │ │ │ │ └──────────────────────────────────────────────────┘ │ │ │ ▲ │ │ ▼ │ │ │ ┌─────────────────────────────────────┴────────────────────────────────┐ │ │ │ Event Bus (broadcast) │ │ │ │ │ │ │ │ HistoryStarted │ HistoryEnded │ RecordsAdded │ SyncCompleted │ ... │ │ │ └──────────────────────────────────────────────────────────────────────┘ │ │ ▲ │ │ ┌───────────────────────────────────┴──────────────────────────────────┐ │ │ │ Control Service (gRPC) │ │ │ │ External event injection from CLI commands │ │ │ └──────────────────────────────────────────────────────────────────────┘ │ └─────────────────────────────────────────────────────────────────────────────┘ ``` ### DaemonHandle A lightweight, cloneable handle that provides access to shared daemon resources: - **Event emission**: `handle.emit(DaemonEvent::...)` broadcasts to all components - **Event subscription**: `handle.subscribe()` returns a receiver for the event bus - **Settings**: `handle.settings()` for configuration access - **Databases**: `handle.history_db()` and `handle.store()` for data access ### Component Trait Components implement a simple lifecycle: ```rust #[async_trait] trait Component: Send + Sync { fn name(&self) -> &'static str; async fn start(&mut self, handle: DaemonHandle) -> Result<()>; async fn handle_event(&mut self, event: &DaemonEvent) -> Result<()>; async fn stop(&mut self) -> Result<()>; } ``` ### Event-Driven Design Components communicate via events rather than direct coupling: | Event | Emitted By | Consumed By | |-------|-----------|-------------| | `HistoryStarted` | History gRPC | Search (logging) | | `HistoryEnded` | History gRPC | Search (index update) | | `RecordsAdded` | Sync | Search (index update) | | `HistoryPruned` | CLI (via Control) | Search (index rebuild) | | `HistoryDeleted` | CLI (via Control) | Search (index rebuild) | | `ForceSync` | CLI (via Control) | Sync | | `ShutdownRequested` | Signal handler | All (graceful shutdown) | ### External Event Injection CLI commands can inject events into a running daemon: ```rust // After `atuin history prune` emit_event(DaemonEvent::HistoryPruned).await?; // After deleting specific items emit_event(DaemonEvent::HistoryDeleted { ids }).await?; // Request immediate sync emit_event(DaemonEvent::ForceSync).await?; ``` This ensures the daemon's search index stays in sync with database changes made by CLI commands. ## Search Architecture The search service uses a [forked version of Nucleo](https://github.com/atuinsh/nucleo-ext) that adds filter and scorer callbacks, enabling efficient filtering and frecency-based ranking. ``` ┌────────────────────────────────────────────────────────────────┐ │ Atuin Daemon │ │ │ │ ┌─────────────────┐ ┌──────────────────────────────────┐ │ │ │ Event System │───▶│ Search Component │ │ │ │ │ │ │ │ │ │ • RecordsAdded │ │ ┌────────────────────────────┐ │ │ │ │ • HistoryEnded │ │ │ Deduplicated Index │ │ │ │ │ • HistoryPruned │ │ │ │ │ │ │ └─────────────────┘ │ │ CommandData per command: │ │ │ │ │ │ • Global frecency │ │ │ │ ┌─────────────────┐ │ │ • Filter indexes (sets) │ │ │ │ │ Background Task │ │ │ • Invocation history │ │ │ │ │ │ │ └────────────────────────────┘ │ │ │ │ Rebuilds │ │ │ │ │ │ │ frecency map │ │ ▼ │ │ │ │ every 60s │───▶│ ┌────────────────────────────┐ │ │ │ └─────────────────┘ │ │ Nucleo (forked) │ │ │ │ │ │ │ │ │ │ │ │ • Filter callback │ │ │ │ │ │ • Scorer callback │ │ │ │ │ │ • Fuzzy matching │ │ │ │ │ └────────────────────────────┘ │ │ │ └──────────────────────────────────┘ │ │ │ │ │ │ gRPC (Unix socket) │ └──────────────────────────────────────│─────────────────────────┘ │ ▼ ┌─────────────────────────────────────────────────────────────────┐ │ Search TUI (Client) │ │ │ │ 1. Send query + filter mode + context to daemon │ │ 2. Receive matching history IDs (ranked by frecency) │ │ 3. Hydrate full records from local SQLite database │ │ 4. Display results in TUI │ └─────────────────────────────────────────────────────────────────┘ ``` ### Nucleo Fork The [nucleo-ext fork](https://github.com/atuinsh/nucleo-ext) adds two key features to Nucleo: 1. **Filter callback**: Pre-filter items before fuzzy matching (used for directory/host/session filtering) 2. **Scorer callback**: Compute custom scores after matching (used for frecency ranking) ```rust // Filter: only include commands run in current directory nucleo.set_filter(Some(Arc::new(|cmd: &String| { passing_commands.contains(cmd) }))); // Scorer: combine fuzzy score with frecency nucleo.set_scorer(Some(Arc::new(|cmd: &String, fuzzy_score: u32| { let frecency = frecency_map.get(cmd).unwrap_or(0); fuzzy_score + (frecency * 10) }))); ``` ### Deduplicated Index Commands are stored once per unique command text, with metadata tracking all invocations: ```rust struct CommandData { command: String, invocations: Vec<Invocation>, // All times this command was run global_frecency: FrecencyData, // Precomputed frecency score // O(1) filter indexes directories: HashSet<String>, // All cwds where command was run hosts: HashSet<String>, // All hostnames sessions: HashSet<String>, // All session IDs } ``` This deduplication means: - **Fewer items to match**: ~13K unique commands vs ~62K history entries - **O(1) filter checks**: HashSet lookups instead of scanning invocations - **Single frecency score**: Global frecency computed once, used for all filter modes ### Frecency Scoring Frecency (frequency + recency) scoring prioritizes recently and frequently used commands: ```rust fn compute_frecency(count: u32, last_used: i64, now: i64) -> u32 { let age_hours = (now - last_used) / 3600; // Recency: decays over time (half-life ~24 hours) let recency = (100.0 * (-age_hours as f64 / 24.0).exp()) as u32; // Frequency: logarithmic scaling let frequency = (count.ln() * 20.0).min(100.0) as u32; recency + frequency } ``` The frecency map is: - **Precomputed by background task** every 60 seconds - **Never computed inline** during search (no latency impact) - **Graceful fallback**: If unavailable, search works without frecency ranking ### Filter Mode Implementation | Filter Mode | Implementation | |-------------|----------------| | Global | No filter (all commands) | | Directory | `command.directories.contains(cwd)` | | Workspace | `command.directories.any(\|d\| d.starts_with(git_root))` | | Host | `command.hosts.contains(hostname)` | | Session | `command.sessions.contains(session_id)` | Filters are pre-computed into a HashSet before the search, making the filter callback O(1). ### Search Flow 1. **Daemon startup**: Loads history from SQLite in pages, builds deduplicated index 2. **Frecency precompute**: Background task builds frecency map after history loads 3. **Search request**: Client sends query with filter mode and context 4. **Filter**: Pre-computed HashSet determines which commands pass the filter 5. **Match**: Nucleo fuzzy matches the query against command text 6. **Score**: Frecency scorer ranks results (fuzzy score + frecency * 10) 7. **Response**: Returns history IDs for the most recent invocation of each matching command 8. **Hydration**: Client fetches full records from local SQLite ### Configuration ```toml # Enable daemon + autostart [daemon] enabled = true autostart = true # Enable daemon-based fuzzy search [search] search_mode = "daemon-fuzzy" ``` ## Performance Performance varies based on several factors, but in most initial testing with the new architecture shows improvement: * **Nucleo performs searches up to 4.5x faster**: direct DB search averages 18.07ms, but the daemon completes the same queries in 3.99ms. * **IPC overhead is significant, but acceptable**: a significant amount of wall-time is taken up by the transfer of data over IPC (via UDS in this case). This averages to about ~7.8ms and accounts for 66% of client-side wall time. * **Tail latency improves at every layer**: p99 times correspond to initial requests, worst-case query patterns, etc. but the average p99 daemon-based response time is 3.6x better than the associated DB-based search p99 time * **Query complexity no longer impacts performance**: the Nucleo-based search shows consistent 2-7ms times regardless of query pattern. The DB-based search had a 17x variance (3.59ms to 62.46ms). Interestingly, @ellie - who has a larger history store than I do - gets even better performance on the IPC layer. This could use a lot more testing in various edge cases and on various hardware, but seems promising. ### Regular DB search ``` Individual calls for: db_search -------------------------------------------------------------------------------------------------------------- # Wall Busy Idle Fields -------------------------------------------------------------------------------------------------------------- 1 32.25ms 32.20ms 47.70µs {"mode":"Fuzzy","query":"^"} 2 19.48ms 19.40ms 84.20µs {"mode":"Fuzzy","query":"^c"} 3 20.40ms 20.10ms 297.00µs {"mode":"Fuzzy","query":"^ca"} 4 13.07ms 13.00ms 69.90µs {"mode":"Fuzzy","query":"^car"} 5 12.17ms 12.10ms 67.10µs {"mode":"Fuzzy","query":"^carg"} 6 20.78ms 20.70ms 76.60µs {"mode":"Fuzzy","query":"^cargo"} 7 9.15ms 9.10ms 53.20µs {"mode":"Fuzzy","query":"^cargo "} 8 10.24ms 10.00ms 237.00µs {"mode":"Fuzzy","query":"^cargo b"} 9 10.01ms 9.68ms 325.00µs {"mode":"Fuzzy","query":"^cargo bu"} 10 5.89ms 5.83ms 57.20µs {"mode":"Fuzzy","query":"^cargo bui"} 11 8.85ms 8.28ms 568.00µs {"mode":"Fuzzy","query":"^cargo buil"} 12 7.70ms 7.49ms 212.00µs {"mode":"Fuzzy","query":"^cargo build"} 13 3.59ms 3.53ms 57.00µs {"mode":"Fuzzy","query":"^cargo build$"} 14 6.50ms 6.44ms 63.60µs {"mode":"Fuzzy","query":"^cargo "} 15 6.48ms 6.38ms 100.00µs {"mode":"Fuzzy","query":"!"} 16 31.68ms 31.60ms 75.90µs {"mode":"Fuzzy","query":"!g"} 17 62.46ms 62.40ms 58.90µs {"mode":"Fuzzy","query":"!gi"} 18 30.35ms 30.30ms 46.90µs {"mode":"Fuzzy","query":"!git"} 19 53.84ms 53.80ms 40.80µs {"mode":"Fuzzy","query":"!git "} 20 19.24ms 19.20ms 39.70µs {"mode":"Fuzzy","query":"!git c"} 21 22.03ms 22.00ms 34.70µs {"mode":"Fuzzy","query":"!git co"} 22 17.13ms 17.00ms 133.00µs {"mode":"Fuzzy","query":"!git com"} 23 16.14ms 15.90ms 242.00µs {"mode":"Fuzzy","query":"!git comm"} 24 5.11ms 5.08ms 28.60µs {"mode":"Fuzzy","query":"!git commi"} 25 7.31ms 7.26ms 52.70µs {"mode":"Fuzzy","query":"!git commit"} Summary: 25 calls Wall: avg=18.07ms, min=3.59ms, max=62.46ms, p50=13.07ms, p99=62.46ms Busy: avg=17.95ms, min=3.53ms, max=62.40ms, p50=13.00ms, p99=62.40ms ``` ### Daemon-based search **Client** ``` Individual calls for: daemon_search -------------------------------------------------------------------------------------------------------------- # Wall Busy Idle Fields -------------------------------------------------------------------------------------------------------------- 1 13.05ms 2.55ms 10.50ms {"query":"^"} 2 10.65ms 1.40ms 9.25ms {"query":"^c"} 3 10.72ms 1.18ms 9.54ms {"query":"^ca"} 4 5.54ms 485.00µs 5.06ms {"query":"^car"} 5 15.02ms 1.02ms 14.00ms {"query":"^carg"} 6 9.49ms 840.00µs 8.65ms {"query":"^cargo"} 7 5.53ms 555.00µs 4.97ms {"query":"^cargo "} 8 8.56ms 717.00µs 7.84ms {"query":"^cargo b"} 9 12.34ms 1.24ms 11.10ms {"query":"^cargo bu"} 10 8.38ms 650.00µs 7.73ms {"query":"^cargo bui"} 11 13.07ms 770.00µs 12.30ms {"query":"^cargo buil"} 12 17.11ms 709.00µs 16.40ms {"query":"^cargo build"} 13 15.41ms 907.00µs 14.50ms {"query":"^cargo build$"} 14 8.19ms 665.00µs 7.52ms {"query":"^cargo "} 15 7.98ms 1.72ms 6.26ms {"query":"!"} 16 13.56ms 856.00µs 12.70ms {"query":"!g"} 17 8.11ms 624.00µs 7.49ms {"query":"!gi"} 18 14.57ms 775.00µs 13.80ms {"query":"!git"} 19 14.18ms 779.00µs 13.40ms {"query":"!git "} 20 9.62ms 802.00µs 8.82ms {"query":"!git c"} 21 15.50ms 1.50ms 14.00ms {"query":"!git co"} 22 11.58ms 1.48ms 10.10ms {"query":"!git com"} 23 13.82ms 2.12ms 11.70ms {"query":"!git comm"} 24 17.48ms 2.18ms 15.30ms {"query":"!git commi"} 25 14.81ms 1.71ms 13.10ms {"query":"!git commit"} Summary: 25 calls Wall: avg=11.77ms, min=5.53ms, max=17.48ms, p50=12.34ms, p99=17.48ms Busy: avg=1.13ms, min=485.00µs, max=2.55ms, p50=856.00µs, p99=2.55ms ``` **Daemon** ``` Individual calls for: daemon_search_query -------------------------------------------------------------------------------------------------------------- # Wall Busy Idle Fields -------------------------------------------------------------------------------------------------------------- 1 1.75ms 250ns 1.75ms {"query":"^","query_id":1} 2 4.58ms 125ns 4.58ms {"query":"^c","query_id":2} 3 4.39ms 250ns 4.39ms {"query":"^ca","query_id":3} 4 2.52ms 125ns 2.52ms {"query":"^car","query_id":4} 5 4.44ms 250ns 4.44ms {"query":"^carg","query_id":5} 6 3.66ms 167ns 3.66ms {"query":"^cargo","query_id":6} 7 2.38ms 84ns 2.38ms {"query":"^cargo ","query_id":7} 8 4.13ms 84ns 4.13ms {"query":"^cargo b","query_id":8} 9 4.40ms 167ns 4.40ms {"query":"^cargo bu","query_id":9} 10 3.87ms 125ns 3.87ms {"query":"^cargo bui","query_id":10} 11 4.36ms 84ns 4.36ms {"query":"^cargo buil","query_id":11} 12 3.96ms 333ns 3.96ms {"query":"^cargo build","query_id":12} 13 4.61ms 167ns 4.61ms {"query":"^cargo build$","query_id":13} 14 4.20ms 209ns 4.20ms {"query":"^cargo ","query_id":14} 15 238.17µs 167ns 238.00µs {"query":"!","query_id":15} 16 4.44ms 125ns 4.44ms {"query":"!g","query_id":16} 17 3.47ms 83ns 3.47ms {"query":"!gi","query_id":17} 18 4.57ms 125ns 4.57ms {"query":"!git","query_id":18} 19 7.15ms 167ns 7.15ms {"query":"!git ","query_id":19} 20 4.27ms 250ns 4.27ms {"query":"!git c","query_id":20} 21 5.19ms 292ns 5.19ms {"query":"!git co","query_id":21} 22 4.29ms 417ns 4.29ms {"query":"!git com","query_id":22} 23 4.08ms 125ns 4.08ms {"query":"!git comm","query_id":23} 24 4.50ms 167ns 4.50ms {"query":"!git commi","query_id":24} 25 4.35ms 208ns 4.35ms {"query":"!git commit","query_id":25} Summary: 25 calls Wall: avg=3.99ms, min=238.17µs, max=7.15ms, p50=4.29ms, p99=7.15ms Busy: avg=182ns, min=83ns, max=417ns, p50=167ns, p99=417ns ``` **Nucleo matching time (in daemon)** ``` Individual calls for: nucleo_match -------------------------------------------------------------------------------------------------------------- # Wall Busy Idle Fields -------------------------------------------------------------------------------------------------------------- 1 1.73ms 125ns 1.73ms {"query":"^","query_id":1} 2 4.57ms 167ns 4.57ms {"query":"^c","query_id":2} 3 4.37ms 125ns 4.37ms {"query":"^ca","query_id":3} 4 2.51ms 84ns 2.51ms {"query":"^car","query_id":4} 5 4.43ms 125ns 4.43ms {"query":"^carg","query_id":5} 6 3.64ms 125ns 3.64ms {"query":"^cargo","query_id":6} 7 2.37ms 84ns 2.37ms {"query":"^cargo ","query_id":7} 8 4.11ms 125ns 4.11ms {"query":"^cargo b","query_id":8} 9 4.36ms 208ns 4.36ms {"query":"^cargo bu","query_id":9} 10 3.85ms 125ns 3.85ms {"query":"^cargo bui","query_id":10} 11 4.35ms 125ns 4.35ms {"query":"^cargo buil","query_id":11} 12 3.94ms 250ns 3.94ms {"query":"^cargo build","query_id":12} 13 4.59ms 125ns 4.59ms {"query":"^cargo build$","query_id":13} 14 4.18ms 84ns 4.18ms {"query":"^cargo ","query_id":14} 15 220.13µs 125ns 220.00µs {"query":"!","query_id":15} 16 4.43ms 125ns 4.43ms {"query":"!g","query_id":16} 17 3.45ms 125ns 3.45ms {"query":"!gi","query_id":17} 18 4.55ms 125ns 4.55ms {"query":"!git","query_id":18} 19 7.12ms 209ns 7.12ms {"query":"!git ","query_id":19} 20 4.25ms 166ns 4.25ms {"query":"!git c","query_id":20} 21 5.18ms 125ns 5.18ms {"query":"!git co","query_id":21} 22 4.27ms 125ns 4.27ms {"query":"!git com","query_id":22} 23 4.06ms 292ns 4.06ms {"query":"!git comm","query_id":23} 24 4.46ms 166ns 4.46ms {"query":"!git commi","query_id":24} 25 4.31ms 208ns 4.31ms {"query":"!git commit","query_id":25} Summary: 25 calls Wall: avg=3.97ms, min=220.13µs, max=7.12ms, p50=4.27ms, p99=7.12ms Busy: avg=147ns, min=84ns, max=292ns, p50=125ns, p99=292ns ```